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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944138.1_cds_XP_016487070.1_77850
CDS Infomation

[gene=LOC107807238] [db_xref=GeneID:107807238] [protein=acetolactate synthase small subunit 1, chloroplastic-like] [protein_id=XP_016487070.1] [location=complement(join(100135..100218,102663..102728,103334..103486,104120..104242,104340..104444,104877..104960,106095..106247,106652..106735,107920..107988,108516..108599,109273..109486,110668..110909))] [gbkey=CDS]
Sequence

ATGGCGGCGGCAGCGACGGCGACGGGGCTGAGTAAGAAAAATTTGCTACCGGCATTGAGT
AAACCAACTCTTCCGTCTAAACTAGGTCGCCGGAATTTCAGTTTTGGTCTTAAAAAGCTT
TCGCCGGTTATAACTACGGCAAATGCTGTGGCGAGTAGTAGTGGAAGTGGTAGCACTGAT
AATGGTGCTGTTTCAGTCACACGTACGGCTCCACCACTTCCTCCGTCGCCTTCCACCTCT
CGGGTAAAATGTCACACCATTTCAGTATTTGTTGGGGATGAAAGTGGTATAATAAACAGA
ATTGCTGGAGTTTTTGCTCGAAGGGGTTACAATATTGAGTCACTTGCTGTTGGTTTGAAC
AAGGATAAAGCTCTCTTTACCATAGTTGTCTCTGGAACTGAGAAGGTCTTGCAACAGGTT
GTAGAGCAGCTCAACAAGCTTGTGAATGTCCTGAAGGTAGAGGATTTATCAAGAGAACCA
CAAGTAGAACGAGAATTGATGCTCATAAAGCTGAATGCAGATGCAAGCACAAAAGCTGAA
ATCATGTGGTTGGTGGACATCTTCAGAGGAAAAATTGTGGATATATCAGAGCACTTTTTG
ACTATCGAGGTAACTGGTGATCCAGGGAAAATGGCTGCCGTTTTGAGAAATTTAAGCAAG
TTTGGGATCAAAGAACTAGCCCGGACTGGAAAGATCGCTTTGAGACGTGAAAAGATGGGT
GAGGATGCTCCTTTTTGGAGGTTCTCTGCAGCTTCTTATCCAGATCTTGAGGAAAAAATT
CCCAGTGTTGGTATCCTGAACAACAAAAGTCAACCAATTGCCAATGAAGCAAGCAATGAT
TCAAGGGGTGATGTTTATCCCGTGGAATCCAGTGATGATATCTCGGTTCAAGTTCTTGAT
GCCCACTGGGGATATCTGTATGATGGAGATTTGAGTGGGCTTCGGTCGCACACTATATCC
ATGCTTGTCAACAATGCTCCTGGGGTCCTCAATCTGATAACCGGTGTTATATCTCGACGA
GGATATAACGTTCAGAGTCTTGCTGTTGGCCCTGCAGAATCAGAGGGGCTTTCACGCATT
ACAACGGTGGTCCCTGGAACTGATGAAACTATAGGAAAATTGGTCAAGCAATTTTACAAG
TTGGTAGATATTCATGAGGTTCAAGATATAACTCATTTACCATTTGCGGAGCGGGAGCTA
ATGCTCATTAAAGTAGCCGCCAATGCAACAGCAAGGAGGGATGTCCTTGATATTGCCAGT
ATTTTCCGCGCTAAACCTGTTGATGTGTCTGATCATACAGTAACATTGGAGTTGACTGGA
GACTTTAATAAGTTGCTGGCATTGCAAAGATTACTGGAGCCTTATGGCATTTGTGAGGTG
GCTCGTACAGGGCGGATAGCATTGGTGCGAGAATCAGGCGTGGACTCGACATCCCTCCGG
GGTTATCCTCTTCCTTTATAG

Peptide Sequence

PEP ID

XP_016487070.1
PEP Infomation

PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAAAATATGLSKKNLLPALSKPTLPSKLGRRNFSFGLKKLSPVITTANAVASSSGSGSTD
NGAVSVTRTAPPLPPSPSTSRVKCHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN
KDKALFTIVVSGTEKVLQQVVEQLNKLVNVLKVEDLSREPQVERELMLIKLNADASTKAE
IMWLVDIFRGKIVDISEHFLTIEVTGDPGKMAAVLRNLSKFGIKELARTGKIALRREKMG
EDAPFWRFSAASYPDLEEKIPSVGILNNKSQPIANEASNDSRGDVYPVESSDDISVQVLD
AHWGYLYDGDLSGLRSHTISMLVNNAPGVLNLITGVISRRGYNVQSLAVGPAESEGLSRI
TTVVPGTDETIGKLVKQFYKLVDIHEVQDITHLPFAERELMLIKVAANATARRDVLDIAS
IFRAKPVDVSDHTVTLELTGDFNKLLALQRLLEPYGICEVARTGRIALVRESGVDSTSLR
GYPLPL

Transcript Sequence

Gene sequence data has not been registered.